BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D03SP1|AL430037
(951 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig968 1626 0.0
>3x_Contig968
Length = 5045
Score = 1626 bits (816), Expect = 0.0
Identities = 930/954 (97%), Gaps = 14/954 (1%)
Strand = Plus / Minus
Query: 1 cttgtgatgatcaagacgctaaagaaagaggtgtacggcatctgggtgcatactcctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 cttgtgatgatcaagacgctaaagaaagaggtgtacggcatctgggtgcatactcctgaa 2341
Query: 61 gacagacaaaacatctatgaactcattaaatatttactagagaatgaaccaacagattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 gacagacaaaacatctatgaactcattaaatatttactagagaatgaaccaacagattca 2281
Query: 121 ttcacgtagtttgcatatgtagaatatcgttgaaactcattacaggcacaggtttggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 ttcacgtagtttgcatatgtagaatatcgttgaaactcattacaggcacaggtttggcat 2221
Query: 181 ttttttgttcaatatcctaaattgaaattatttagatactacgcagctcgaattataagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 ttttttgttcaatatcctaaattgaaattatttagatactacgcagctcgaattataagc 2161
Query: 241 cggtcatgtagccgatggcggtccagcagcagcagcagcagcagcagcagcagcagcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 cggtcatgtagccgatggcggtccagcagcagcagcagcagcagcagcagcagcagcagc 2101
Query: 301 agcagcagcagcagcagcagcagcagcagcmgcmgcagccttcttttttgtcatcgccct 360
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 2100 agcagcagcagcagcagcagcagcagcagcagcagcagccttcttttttgtcatcgccct 2041
Query: 361 tttcttcggaggcgcasggtctccgtccgcagcctttttggtagccttacgccctctctt 420
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 tttcttcggaggcgcagcggttccgtccgcagcctttttggtagccttacgccctctctt 1981
Query: 421 tgccttaggtttttcctcagcgttccgtaccagttcttttgttcgctacggcagttgacg 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1980 tgccttaggtttttcctcag-gttccgtaccagttcttttgttcgctacggcagttgacg 1922
Query: 481 tttgattcattagactgaccatcagtatgctgtygtgacgctcttctctgcgtcatcggg 540
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1921 tttgattcatt-gactgaccatcagtatgctgttgtgacgctcttctctgcgtcatcggg 1863
Query: 541 ttacccatagaaatacgagtatcgtatgcacttggaacgatgttcgaattcacactttga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1862 ttacccatagaaatacgagtatcgtatgcacttggaacgatgttcgaattcacactttga 1803
Query: 601 tgttttcttctcttcctctttctactctccaatagctcacataattttttagcctactga 660
||||||||||| ||||| ||||||||||||||| ||||| |||| ||||||||||||| |
Sbjct: 1802 tgttttcttct-ttcct-tttctactctccaat-gctca-ataa-tttttagcctact-a 1749
Query: 661 aactgtttgagcgtctgtgtgttgttccagtaccaacggcggccgcagctgcaacgctgt 720
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1748 aactg-ttgagcgtctgtgt-ttgttccagtaccaacggcggccgcagctgcaacgctgt 1691
Query: 721 wcggatgttactcctacagaggagccagaagttttaccattagttgcagcttttcgagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1690 t-ggatgttactcctacagaggagccagaagttttaccattagttgcagcttttcgagca 1632
Query: 781 gcattagcttcagctttcttcagcaatgatgctgccagggtagcggcagttgtkgtagta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1631 gcattagcttcagctttcttcagcaatgatgctgccagggtagcggcagttgtggtagta 1572
Query: 841 gttttttcactaagaattaacattagttgttcatatgtagaactatgttgtgg-agctct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1571 gttttttcactaagaattaacattagttgttcatatgtagaactatgttgtggaagctct 1512
Query: 900 tcatgtaactcaatgtgctctatagca-ctttggtgaacggtt-matacataat 951
||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1511 tcatgtaactcaatgtgctctatagcacctttggtgaacggttcaatacataat 1458
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9646
Number of Sequences: 1807
Number of extensions: 9646
Number of successful extensions: 1468
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)